STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP72699.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
EDP72697.1
Hypothetical protein.
 
 0.999
EDP72700.1
Hypothetical protein.
 
 0.999
EDP72701.1
Hypothetical protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.997
EDP72704.1
Hypothetical protein.
  
 0.970
EDP72696.1
Hypothetical protein; Belongs to the HesB/IscA family.
  
 
 0.879
EDP72703.1
Hypothetical protein.
 
   0.839
EDP72698.1
Hypothetical protein.
       0.790
EDP69983.1
Aminotransferase, class V; COG0520 Selenocysteine lyase.
 
  
 0.749
EDP70128.1
Aminotransferase; COG0520 Selenocysteine lyase.
 
  
 0.709
cysQ
CysQ, sulfite synthesis pathway protein; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
      0.691
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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