STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY87157.1Hypothetical protein. (44 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit; [E] COG0070 Glutamate synthase domain 3.
       0.705
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.625
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.625
pilP
Type 4 fimbrial biogenesis protein PilP; [NU] COG3168 Tfp pilus assembly protein PilP.
       0.625
pilQ
Type 4 fimbrial biogenesis protein PilQ; [NU] COG1450 Type II secretory pathway, component PulD.
       0.625
EDY87236.1
[F] COG0232 dGTP triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
       0.625
EDY87187.1
[NU] COG3167 Tfp pilus assembly protein PilO.
       0.576
pilN
[NU] COG3166 Tfp pilus assembly protein PilN.
       0.554
pilM
Tfp pilus assembly protein, ATPase PilM; [E] COG4820 Ethanolamine utilization protein, possible chaperonin.
       0.554
Your Current Organism:
gamma proteobacterium HTCC5015
NCBI taxonomy Id: 391615
Other names: g. proteobacterium HTCC5015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.