node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDY85372.1 | raiA | GP5015_1378 | GP5015_1143 | [J] COG0088 Ribosomal protein L4. | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | 0.999 |
EDY85372.1 | rplB | GP5015_1378 | GP5015_1379 | [J] COG0088 Ribosomal protein L4. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
EDY85372.1 | rplR | GP5015_1378 | GP5015_1376 | [J] COG0088 Ribosomal protein L4. | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
EDY85372.1 | rplV | GP5015_1378 | GP5015_1375 | [J] COG0088 Ribosomal protein L4. | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
EDY85372.1 | rplY | GP5015_1378 | GP5015_43 | [J] COG0088 Ribosomal protein L4. | Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.999 |
EDY85372.1 | rpmI | GP5015_1378 | GP5015_1105 | [J] COG0088 Ribosomal protein L4. | [J] COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.999 |
EDY85372.1 | rpsE | GP5015_1378 | GP5015_1374 | [J] COG0088 Ribosomal protein L4. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
EDY85372.1 | rpsH | GP5015_1378 | GP5015_1371 | [J] COG0088 Ribosomal protein L4. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
EDY85372.1 | rpsO | GP5015_1378 | GP5015_1190 | [J] COG0088 Ribosomal protein L4. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
EDY85372.1 | rpsS | GP5015_1378 | GP5015_1369 | [J] COG0088 Ribosomal protein L4. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
raiA | EDY85372.1 | GP5015_1143 | GP5015_1378 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | [J] COG0088 Ribosomal protein L4. | 0.999 |
raiA | rplB | GP5015_1143 | GP5015_1379 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
raiA | rplR | GP5015_1143 | GP5015_1376 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
raiA | rplV | GP5015_1143 | GP5015_1375 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
raiA | rplY | GP5015_1143 | GP5015_43 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.999 |
raiA | rpmI | GP5015_1143 | GP5015_1105 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | [J] COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.999 |
raiA | rpsE | GP5015_1143 | GP5015_1374 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
raiA | rpsH | GP5015_1143 | GP5015_1371 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
raiA | rpsO | GP5015_1143 | GP5015_1190 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
raiA | rpsS | GP5015_1143 | GP5015_1369 | Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1). | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |