STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI70317.1Putative ABC transporter extracellular solute binding protein. (574 aa)    
Predicted Functional Partners:
AGI70316.1
Putative ABC transporter inner membrane component.
 
 0.992
AGI70309.1
Putative ABC transporter permease protein.
 
 0.989
AGI70315.1
Putative ABC transporter inner membrane component.
 
 0.983
AGI70313.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.980
AGI70314.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.980
AGI70310.1
Putative ABC transporter permease-protein.
 
 0.978
glpK
Glycerol kinase GlpK; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
     
 0.578
AGI70321.1
Putative iron-containing alcohol dehydrogenase.
 
     0.571
AGI72980.1
Putative ABC transporter permease protein.
  
 
 0.511
AGI72944.1
ABC trans-affinity zinc uptake system membrane protein.
  
 
 0.510
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.