STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI70670.1IS3 family element orfA. (91 aa)    
Predicted Functional Partners:
AGI71707.1
Putative IS3 family transposase.
 
     0.597
AGI72823.1
Putative IS3 family transposase.
 
     0.597
AGI74379.1
Putative IS3 family transposase.
 
     0.597
AGI72125.1
Putative IS3 family transposase.
 
     0.589
AGI72704.1
Putative IS3 family transposase.
 
     0.589
AGI72992.1
Putative IS3 family transposase.
 
     0.589
AGI70669.1
IS3 family element orfB.
  
    0.512
AGI71630.1
Hypothetical protein.
 
    0.505
AGI71011.1
Putative IS3 family transposase.
  
     0.475
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.