STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdhBPyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (458 aa)    
Predicted Functional Partners:
lpdA1
Dihydrolipoyl dehydrogenase E3 component of2-oxoglutarate dehydrogenase complex.
 0.999
pdhA
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 0.999
lpdA2
Dihydrolipoyl dehydrogenase LpdA.
 0.999
acoA
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 0.999
AGI71939.1
Putative acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 0.999
AGI73927.1
Dehydrogenase E1 component subunitalpha.
 0.999
lpdA4
Dihydrolipoyl dehydrogenase LpdA.
 0.999
AGI74220.1
Putative acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 0.999
pdhC1
Dihydrolipoyllysine-residue acetyltransferase PdhC; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
0.998
lpdA3
Dihydrolipoyl dehydrogenase LpdA.
  
 0.996
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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