STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI72320.1Divergent polysaccharide deacetylase-like protein. (495 aa)    
Predicted Functional Partners:
AGI70938.1
Hypothetical protein.
  
     0.763
AGI71148.1
Hypothetical protein.
  
     0.761
AGI74059.1
Hypothetical protein.
  
     0.755
AGI70960.1
Hypothetical protein.
  
     0.746
AGI73296.1
Putative sporulation/cell-division domain protein.
  
     0.746
AGI74060.1
Hypothetical protein.
  
     0.743
AGI72549.1
Hypothetical protein.
 
     0.723
AGI72836.1
Hypothetical protein.
  
     0.722
trpD
Anthranilate phosphoribosyltransferase TrpD; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
     
 0.704
AGI70803.1
Hypothetical protein.
  
     0.699
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.