STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI72712.1Hypothetical protein. (355 aa)    
Predicted Functional Partners:
AGI72713.1
Putative oxidoreductase.
 
   
 0.927
AGI72714.1
Hypothetical protein.
 
   
 0.927
AGI72715.1
Putative aminomethyltransferase; Belongs to the GcvT family.
 
   
 0.885
AGI72725.1
Hypothetical protein; With putative aminomethyltransferase activityconserved; Belongs to the GcvT family.
 
   
 0.813
AGI72722.1
Hypothetical protein.
 
   
 0.792
AGI72717.1
Putative glutamine amidotransferase.
 
     0.760
AGI72718.1
Hypothetical protein.
 
     0.739
AGI72719.1
Glutamate synthase-like protein; Belongs to the glutamate synthase family.
 
     0.708
soxG
Sarcosine oxidase1 subunit gamma.
  
     0.668
AGI72726.1
Hypothetical protein DUF6.
  
     0.650
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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