STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI73280.1Thioesterase-like protein. (160 aa)    
Predicted Functional Partners:
AGI73281.1
Thioesterase-like protein.
  
0.955
AGI73279.1
Putative DNA-damage-inducible protein.
 
    0.875
AGI73282.1
Putative MerR family transcriptional regulator.
  
    0.721
AGI71151.1
Hypothetical protein.
  
     0.557
metG
methionyl-tRNA ligase MetG; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.540
fadJ
Fatty acid oxidation complex subunit alpha; Includes enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase.
 
 
 0.515
AGI72271.1
Acyl carrier protein.
 
 
 0.510
plsX
Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.470
AGI72767.1
Putative sterol-binding protein.
 
     0.452
AGI70690.1
Putative ATPase.
 
   
 0.451
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.