STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI73398.1Putative DNA-binding protein. (130 aa)    
Predicted Functional Partners:
AGI71437.1
Hypothetical protein.
  
     0.712
AGI72237.1
Hypothetical protein.
  
     0.683
AGI72388.1
Hypothetical protein.
  
     0.675
AGI72007.1
Trimethylamine methyltransferase; Belongs to the trimethylamine methyltransferase family.
  
     0.662
AGI72238.1
Hypothetical protein.
  
     0.616
proA2
Gamma-glutamyl phosphate reductase ProA; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
       0.497
AGI72347.1
Hypothetical protein.
  
     0.489
AGI72035.1
Putative AraC family transcriptional regulator.
  
  
 0.447
AGI72236.1
Pterin-binding domain-containing protein.
 
    0.443
proC2
Pyrroline-5-carboxylate reductase ProC; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
    0.438
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.