STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI74185.1Putative ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (337 aa)    
Predicted Functional Partners:
AGI74186.1
Putative ribose ABC transporter ATP-binding protein.
 0.992
AGI73929.1
Sugar ABC transporter ATP-binding protein.
 0.960
AGI74236.1
Sugar ABC transporter ATP-binding protein.
 0.960
AGI74200.1
Sugar ABC transporter ATP-binding protein.
 0.958
AGI71598.1
Sugar ABC transporter ATP-binding protein.
 0.954
AGI74187.1
Putative ABC transporter periplasmatic substrate binding protein; TorT-like.
 
 
 0.921
AGI72483.1
Putative ABC transporter periplasmic binding protein.
 
 0.848
AGI74237.1
Sugar ABC transporter periplasmatic substrate-binding protein.
 
 0.836
AGI72482.1
Monosaccharide ABC-transporter ATP-binding protein.
 
 0.822
AGI73930.1
Sugar ABC transporter periplasmatic substrate-binding protein.
 
 
 0.808
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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