STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI74575.1Putative branched-chain amino acid transport permease component; Belongs to the binding-protein-dependent transport system permease family. (368 aa)    
Predicted Functional Partners:
AGI74574.1
Putative high-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
AGI74576.1
High-affinity branched-chain amino acid transport ATP-binding protein.
 
 0.996
AGI74577.1
High-affinity branched-chain amino acid transport ATP-binding protein.
 
 0.996
AGI74573.1
Putative aliphatic amidase expression-regulating protein.
 
 
 0.987
urtE
Putative urea ABC-transporter ATP-binding protein UrtE.
 
 0.971
urtB
Putative urea ABC-transporter permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 0.970
urtD
Putative urea ABC-transporter ATP-binding protein UrtD.
 
 0.969
urtA
Putative urea ABC-transporter periplasmatic substrate-binding protein UrtA.
 
 
 0.968
amiC2
Aliphatic amidase expression-regulating protein.
 
  
 0.925
urtC
Putative urea ABC-transporter permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.922
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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