STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI74594.1Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. (461 aa)    
Predicted Functional Partners:
AGI71424.1
Aldehyde dehydrogenase.
  
  
 
0.904
AGI74603.1
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.900
AGI74595.1
UCP01500/DUF2270 family protein.
       0.613
AGI74592.1
Putative choline dehydrogenase.
  
  
 0.610
betC2
Choline-sulfatase BetC.
  
  
 0.600
AGI74591.1
Mandelate racemase/muconate lactonizing enzyme family protein; D-galactonate dehydratase-like.
     
 0.581
AGI74590.1
Putative sulfatase.
  
  
 0.465
AGI72550.1
Sensor transduction histidine kinase.
  
  
 0.420
fmt
methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.411
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
 
0.409
Your Current Organism:
Octadecabacter arcticus
NCBI taxonomy Id: 391616
Other names: O. arcticus 238, Octadecabacter arcticus 238, Octadecabacter arcticus CIP 106732, Octadecabacter arcticus str. 238, Octadecabacter arcticus strain 238
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