Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO89939.1 | AFO89940.1 | PGA1_c01960 | PGA1_c01970 | Putative hydrolase. | Hypothetical protein. | 0.926 |
AFO89939.1 | crcB | PGA1_c01960 | PGA1_c01940 | Putative hydrolase. | crcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.841 |
AFO89939.1 | rarA | PGA1_c01960 | PGA1_c01930 | Putative hydrolase. | Replication-associated recombination protein A. | 0.676 |
AFO89939.1 | rluC | PGA1_c01960 | PGA1_c01950 | Putative hydrolase. | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.873 |
AFO89939.1 | rplQ | PGA1_c01960 | PGA1_c01910 | Putative hydrolase. | 50S ribosomal protein L17. | 0.443 |
AFO89940.1 | AFO89939.1 | PGA1_c01970 | PGA1_c01960 | Hypothetical protein. | Putative hydrolase. | 0.926 |
AFO89940.1 | crcB | PGA1_c01970 | PGA1_c01940 | Hypothetical protein. | crcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.824 |
AFO89940.1 | rarA | PGA1_c01970 | PGA1_c01930 | Hypothetical protein. | Replication-associated recombination protein A. | 0.676 |
AFO89940.1 | rluC | PGA1_c01970 | PGA1_c01950 | Hypothetical protein. | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.900 |
AFO89940.1 | rplC | PGA1_c01970 | PGA1_c01550 | Hypothetical protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.451 |
AFO89940.1 | rplO | PGA1_c01970 | PGA1_c01850 | Hypothetical protein. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.433 |
AFO89940.1 | rplQ | PGA1_c01970 | PGA1_c01910 | Hypothetical protein. | 50S ribosomal protein L17. | 0.476 |
crcB | AFO89939.1 | PGA1_c01940 | PGA1_c01960 | crcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Putative hydrolase. | 0.841 |
crcB | AFO89940.1 | PGA1_c01940 | PGA1_c01970 | crcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Hypothetical protein. | 0.824 |
crcB | rarA | PGA1_c01940 | PGA1_c01930 | crcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Replication-associated recombination protein A. | 0.739 |
crcB | rluC | PGA1_c01940 | PGA1_c01950 | crcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.860 |
crcB | rplQ | PGA1_c01940 | PGA1_c01910 | crcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 50S ribosomal protein L17. | 0.539 |
rarA | AFO89939.1 | PGA1_c01930 | PGA1_c01960 | Replication-associated recombination protein A. | Putative hydrolase. | 0.676 |
rarA | AFO89940.1 | PGA1_c01930 | PGA1_c01970 | Replication-associated recombination protein A. | Hypothetical protein. | 0.676 |
rarA | crcB | PGA1_c01930 | PGA1_c01940 | Replication-associated recombination protein A. | crcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.739 |
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