STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livHPutative high-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (291 aa)    
Predicted Functional Partners:
livM
Putative high-affinity branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
AFO89998.1
Putative amino acid binding protein.
 
 
 0.992
livG
Putative high-affinity branched-chain amino acid transport ATP-binding protein LivG.
  
 0.978
livF
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
  
 0.967
AFO92896.1
High-affinity branched-chain amino acid transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.964
AFO91358.1
Putative branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.943
AFO92792.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.914
AFO92900.1
High-affinity branched-chain amino acid transport ATP-binding protein.
  
 0.893
AFO91298.1
Putative branched-chain amino acid transport ATP-binding protein.
  
 0.865
AFO92789.1
Branched-chain amino acid transport system ATP-binding protein.
  
 0.860
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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