STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaCPhenylacetic acid degradation protein PaaC. (257 aa)    
Predicted Functional Partners:
paaD
Phenylacetic acid degradation protein PaaD.
 
 0.999
paaB
Phenylacetic acid degradation protein PaaB.
 0.999
paaA
Phenylacetic acid degradation protein PaaA.
 0.999
paaE
Phenylacetic acid degradation NADH oxidoreductase PaaE.
 0.997
paaI
Phenylacetic acid degradation protein PaaI.
 
 
 0.987
AFO90137.1
Phenylacetic acid degradation protein paaA-like protein.
 
  
  0.986
paaZ
Phenylacetic acid degradation protein PaaZ.
 
  
 0.972
paaK1
phenylacetate-CoA ligase PaaK; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.971
paaG
Putative enoyl-CoA hydratase PaaG.
 
 
 0.966
fadB1
Putative enoyl-CoA hydratase FadB; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.959
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.