STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoTPhosphate uptake ABC transporter permease protein PhoT. (456 aa)    
Predicted Functional Partners:
phoD
Phosphate uptake ABC transporter periplasmic solute-binding protein PhoD.
 
 0.993
phoE
Phosphate uptake ABC transporter permease protein PhoE.
 
  
 
0.982
phnC
Phosphonates import ATP-binding protein PhnC; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 0.980
phnH
Protein PhnH.
 
  
 0.815
phnG
Protein PhnG.
 
  
 0.747
AFO90156.1
Putative phosphonate metabolism.
 
     0.718
phnK
Phosphonates transport ATP-binding protein PhnK.
 
  
 0.699
phnL
Phosphonates transport ATP-binding protein PhnL.
 
  
 0.688
phnI
Protein PhnI.
 
  
 0.687
AFO90157.1
Putative phosphonates metabolism transcriptional regulator phnF.
 
  
 0.657
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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