STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO90168.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
AFO90169.1
Putative glycosyltransferase protein.
     0.995
AFO90171.1
Putative glycosyltransferase protein.
 
  
 0.960
AFO90167.1
Hypothetical protein.
 
     0.950
AFO90173.1
Hypothetical protein.
 
     0.918
wcaL
Putative colanic acid biosynthesis glycosyltransferase WcaL.
 
  
 0.915
AFO90170.1
Putative phosphoglycerate mutase family protein.
 
    0.902
AFO90180.1
Hypothetical protein.
 
     0.787
AFO90186.1
Putative ABC transporter cyclic nucleotide-binding protein.
 
     0.780
AFO92818.1
Putative cyclic nucleotide-binding ABC transporter transmembrane protein.
 
     0.779
AFO90178.1
Putative extracellular solute-binding protein.
  
     0.774
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.