STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO90259.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
AFO90260.1
Hypothetical protein.
 
  
 0.949
AFO90258.1
Exopolysaccharide production protein ExoY-like protein.
 
  
 0.903
AFO90261.1
Polysaccharide biosynthesis protein ExoT-like protein.
 
  
 0.845
AFO90272.1
Putative glycosyl transferase, family 2.
   
 0.828
nuoEF
NADH-quinone oxidoreductase subunits E/F (fused).
     
 0.811
AFO90267.1
Dimodular nonribosomal peptide synthetase.
 
   
 0.805
AFO90268.1
Putative glycosyl transferase.
 
   
 0.802
AFO90270.1
Hypothetical protein.
 
  
 0.799
AFO90262.1
Putative glycosyl transferase.
 
  
 0.781
AFO90269.1
Polyketide synthase.
 
   
 0.778
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.