STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO90446.12-hydroxy-3-oxopropionate reductase-like protein. (321 aa)    
Predicted Functional Partners:
mmsA
Methylmalonate-semialdehyde dehydrogenase.
 
 
 0.935
AFO91199.1
Putative 3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.925
mmsB
3-hydroxyisobutyrate dehydrogenase MmsB; Belongs to the HIBADH-related family.
  
  
 
0.925
fadJ
Fatty acid oxidation complex FadJ subunit alpha; Includes enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.918
AFO92859.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.913
AFO92918.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.913
AFO92942.1
Aldehyde dehydrogenase.
  
 
 0.913
pccA
propionyl-CoA carboxylase alpha chain.
  
 
 0.833
acsA
Acetyl-coenzyme A synthetase AcsA.
  
 
  0.814
prpE
propionate-CoA ligase PrpE.
  
 
  0.814
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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