STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO90500.1Universal stress protein. (136 aa)    
Predicted Functional Partners:
AFO90501.1
Putative zinc-binding alcohol dehydrogenase.
 
  
 0.743
dctQ1
TRAP transporter, subunit DctQ.
 
     0.719
hisD1
Histidinol dehydrogenase HisD; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
    0.714
AFO90502.1
Putative gluconate 5-dehydrogenase.
  
    0.694
AFO90498.1
Putative sulfopyruvate decarboxylase subunit beta.
  
    0.673
dctM1
TRAP transporter, subunit DctM.
       0.673
AFO90499.1
Putative sulfopyruvate decarboxylase subunit alpha.
       0.661
mdlB
(S)-mandelate dehydrogenase MdlB.
       0.655
dctP1
TRAP transporter, subunit DctP.
 
     0.550
AFO90507.1
Hypothetical protein.
       0.407
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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