STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO90743.1Phosphoglycolate phosphatase-like protein. (221 aa)    
Predicted Functional Partners:
AFO89939.1
Putative hydrolase.
  
  
 
0.921
AFO90583.1
Hydrolase, HAD-superfamily.
  
  
  0.914
AFO92325.1
Putative glyoxylate/hydroxypyruvate reductase A.
    
 0.907
glcF
Glycolate oxidase iron-sulfur subunit.
    
 0.906
glcE
Glycolate oxidase subunit GlcE.
    
 0.906
glcD
Glycolate oxidase subunit GlcD.
    
 0.906
gyaR1
Glyoxylate reductase GyaR; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.902
gyaR2
Glyoxylate reductase GyaR; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.902
glmU
Bifunctional enzyme GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
     
 0.717
glmS
Glucosamine--fructose-6-phosphate aminotransferase GlmS; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.694
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.