Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO90779.1 | AFO90780.1 | PGA1_c10600 | PGA1_c10610 | Hypothetical protein. | Hypothetical protein. | 0.980 |
AFO90779.1 | AFO90782.1 | PGA1_c10600 | PGA1_c10630 | Hypothetical protein. | Hypothetical protein. | 0.467 |
AFO90779.1 | AFO90783.1 | PGA1_c10600 | PGA1_c10640 | Hypothetical protein. | Hypothetical protein. | 0.604 |
AFO90779.1 | prfC | PGA1_c10600 | PGA1_c10620 | Hypothetical protein. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.678 |
AFO90779.1 | rhlE1 | PGA1_c10600 | PGA1_c10590 | Hypothetical protein. | Putative ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | 0.495 |
AFO90780.1 | AFO90779.1 | PGA1_c10610 | PGA1_c10600 | Hypothetical protein. | Hypothetical protein. | 0.980 |
AFO90780.1 | AFO90782.1 | PGA1_c10610 | PGA1_c10630 | Hypothetical protein. | Hypothetical protein. | 0.467 |
AFO90780.1 | AFO90783.1 | PGA1_c10610 | PGA1_c10640 | Hypothetical protein. | Hypothetical protein. | 0.400 |
AFO90780.1 | AFO91661.1 | PGA1_c10610 | PGA1_c19710 | Hypothetical protein. | Alginate biosynthesis protein algA-like protein. | 0.464 |
AFO90780.1 | prfC | PGA1_c10610 | PGA1_c10620 | Hypothetical protein. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.713 |
AFO90780.1 | rhlE1 | PGA1_c10610 | PGA1_c10590 | Hypothetical protein. | Putative ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | 0.501 |
AFO90782.1 | AFO90779.1 | PGA1_c10630 | PGA1_c10600 | Hypothetical protein. | Hypothetical protein. | 0.467 |
AFO90782.1 | AFO90780.1 | PGA1_c10630 | PGA1_c10610 | Hypothetical protein. | Hypothetical protein. | 0.467 |
AFO90782.1 | AFO90783.1 | PGA1_c10630 | PGA1_c10640 | Hypothetical protein. | Hypothetical protein. | 0.613 |
AFO90782.1 | prfC | PGA1_c10630 | PGA1_c10620 | Hypothetical protein. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.548 |
AFO90783.1 | AFO90779.1 | PGA1_c10640 | PGA1_c10600 | Hypothetical protein. | Hypothetical protein. | 0.604 |
AFO90783.1 | AFO90780.1 | PGA1_c10640 | PGA1_c10610 | Hypothetical protein. | Hypothetical protein. | 0.400 |
AFO90783.1 | AFO90782.1 | PGA1_c10640 | PGA1_c10630 | Hypothetical protein. | Hypothetical protein. | 0.613 |
AFO90783.1 | prfC | PGA1_c10640 | PGA1_c10620 | Hypothetical protein. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.646 |
AFO91661.1 | AFO90780.1 | PGA1_c19710 | PGA1_c10610 | Alginate biosynthesis protein algA-like protein. | Hypothetical protein. | 0.464 |
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