Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFO90999.1 | codA | PGA1_c12820 | PGA1_c26940 | Dihydroorotate dehydrogenase-like protein. | Cytosine deaminase CodA. | 0.927 |
| AFO90999.1 | deoA | PGA1_c12820 | PGA1_c11940 | Dihydroorotate dehydrogenase-like protein. | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.913 |
| AFO90999.1 | deoD | PGA1_c12820 | PGA1_c03820 | Dihydroorotate dehydrogenase-like protein. | Purine nucleoside phosphorylase deoD-type. | 0.900 |
| AFO90999.1 | guaA | PGA1_c12820 | PGA1_c14610 | Dihydroorotate dehydrogenase-like protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.636 |
| AFO90999.1 | psuG | PGA1_c12820 | PGA1_c15050 | Dihydroorotate dehydrogenase-like protein. | Hypothetical protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.903 |
| AFO90999.1 | pyrF | PGA1_c12820 | PGA1_c32450 | Dihydroorotate dehydrogenase-like protein. | Orotidine 5'-phosphate decarboxylase PyrF. | 0.864 |
| AFO90999.1 | upp | PGA1_c12820 | PGA1_c11960 | Dihydroorotate dehydrogenase-like protein. | Uracil phosphoribosyltransferase Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.945 |
| codA | AFO90999.1 | PGA1_c26940 | PGA1_c12820 | Cytosine deaminase CodA. | Dihydroorotate dehydrogenase-like protein. | 0.927 |
| codA | deoA | PGA1_c26940 | PGA1_c11940 | Cytosine deaminase CodA. | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.918 |
| codA | deoD | PGA1_c26940 | PGA1_c03820 | Cytosine deaminase CodA. | Purine nucleoside phosphorylase deoD-type. | 0.900 |
| codA | psuG | PGA1_c26940 | PGA1_c15050 | Cytosine deaminase CodA. | Hypothetical protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.900 |
| codA | upp | PGA1_c26940 | PGA1_c11960 | Cytosine deaminase CodA. | Uracil phosphoribosyltransferase Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.937 |
| deoA | AFO90999.1 | PGA1_c11940 | PGA1_c12820 | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Dihydroorotate dehydrogenase-like protein. | 0.913 |
| deoA | codA | PGA1_c11940 | PGA1_c26940 | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Cytosine deaminase CodA. | 0.918 |
| deoA | deoD | PGA1_c11940 | PGA1_c03820 | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Purine nucleoside phosphorylase deoD-type. | 0.965 |
| deoA | guaA | PGA1_c11940 | PGA1_c14610 | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.551 |
| deoA | psuG | PGA1_c11940 | PGA1_c15050 | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Hypothetical protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. | 0.902 |
| deoA | surE | PGA1_c11940 | PGA1_c10770 | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.939 |
| deoA | upp | PGA1_c11940 | PGA1_c11960 | Thymidine phosphorylase DeoA; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Uracil phosphoribosyltransferase Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.984 |
| deoD | AFO90999.1 | PGA1_c03820 | PGA1_c12820 | Purine nucleoside phosphorylase deoD-type. | Dihydroorotate dehydrogenase-like protein. | 0.900 |
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