STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91173.1Hypothetical protein. (526 aa)    
Predicted Functional Partners:
AFO90273.1
Hypothetical protein.
 
  
 0.746
AFO91551.1
Hypothetical protein.
  
     0.571
AFO91355.1
Glycosyl transferase-like protein.
 
  
 0.544
AFO91172.1
S-adenosylmethionine uptake transporter-like protein.
       0.517
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
       0.491
AFO90918.1
Hypothetical protein.
  
     0.475
AFO91847.1
Putative serralysin.
  
     0.470
AFO92175.1
Hypothetical protein.
  
     0.438
AFO89825.1
Hypothetical protein.
  
     0.417
AFO91832.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.406
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.