Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO91214.1 | AFO92909.1 | PGA1_c15030 | PGA1_c32710 | Phospholipase-like protein. | Hypothetical protein. | 0.497 |
AFO91214.1 | bdhA | PGA1_c15030 | PGA1_c15020 | Phospholipase-like protein. | D-beta-hydroxybutyrate dehydrogenase BdhA. | 0.721 |
AFO91214.1 | phaC | PGA1_c15030 | PGA1_c20930 | Phospholipase-like protein. | Poly(3-hydroxyalkanoate) polymerase PhaC. | 0.692 |
AFO91214.1 | phaR | PGA1_c15030 | PGA1_c20910 | Phospholipase-like protein. | PHA synthesis repressor protein PhaR. | 0.579 |
AFO91214.1 | phaZ | PGA1_c15030 | PGA1_c20940 | Phospholipase-like protein. | PHA depolymerase PhaZ. | 0.462 |
AFO91214.1 | virD4 | PGA1_c15030 | PGA1_c22970 | Phospholipase-like protein. | Putative protein VirD4. | 0.428 |
AFO92909.1 | AFO91214.1 | PGA1_c32710 | PGA1_c15030 | Hypothetical protein. | Phospholipase-like protein. | 0.497 |
bdhA | AFO91214.1 | PGA1_c15020 | PGA1_c15030 | D-beta-hydroxybutyrate dehydrogenase BdhA. | Phospholipase-like protein. | 0.721 |
bdhA | phaC | PGA1_c15020 | PGA1_c20930 | D-beta-hydroxybutyrate dehydrogenase BdhA. | Poly(3-hydroxyalkanoate) polymerase PhaC. | 0.406 |
phaC | AFO91214.1 | PGA1_c20930 | PGA1_c15030 | Poly(3-hydroxyalkanoate) polymerase PhaC. | Phospholipase-like protein. | 0.692 |
phaC | bdhA | PGA1_c20930 | PGA1_c15020 | Poly(3-hydroxyalkanoate) polymerase PhaC. | D-beta-hydroxybutyrate dehydrogenase BdhA. | 0.406 |
phaC | phaR | PGA1_c20930 | PGA1_c20910 | Poly(3-hydroxyalkanoate) polymerase PhaC. | PHA synthesis repressor protein PhaR. | 0.894 |
phaC | phaZ | PGA1_c20930 | PGA1_c20940 | Poly(3-hydroxyalkanoate) polymerase PhaC. | PHA depolymerase PhaZ. | 0.995 |
phaR | AFO91214.1 | PGA1_c20910 | PGA1_c15030 | PHA synthesis repressor protein PhaR. | Phospholipase-like protein. | 0.579 |
phaR | phaC | PGA1_c20910 | PGA1_c20930 | PHA synthesis repressor protein PhaR. | Poly(3-hydroxyalkanoate) polymerase PhaC. | 0.894 |
phaR | phaZ | PGA1_c20910 | PGA1_c20940 | PHA synthesis repressor protein PhaR. | PHA depolymerase PhaZ. | 0.950 |
phaZ | AFO91214.1 | PGA1_c20940 | PGA1_c15030 | PHA depolymerase PhaZ. | Phospholipase-like protein. | 0.462 |
phaZ | phaC | PGA1_c20940 | PGA1_c20930 | PHA depolymerase PhaZ. | Poly(3-hydroxyalkanoate) polymerase PhaC. | 0.995 |
phaZ | phaR | PGA1_c20940 | PGA1_c20910 | PHA depolymerase PhaZ. | PHA synthesis repressor protein PhaR. | 0.950 |
virD4 | AFO91214.1 | PGA1_c22970 | PGA1_c15030 | Putative protein VirD4. | Phospholipase-like protein. | 0.428 |