STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91270.1Alcohol dehydrogenase, zinc binding protein. (333 aa)    
Predicted Functional Partners:
AFO90269.1
Polyketide synthase.
 
 
 0.968
fabF1
3-oxoacyl-[acyl-carrier-protein] synthase FabF; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.903
fabF2
3-oxoacyl-[acyl-carrier-protein] synthase FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.897
fabB
3-oxoacyl-[acyl-carrier-protein] synthase FabB; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.887
fabD
Malonyl CoA-acyl carrier protein transacylase FabD.
 
    
 0.837
AFO91272.1
Putative aminoglycoside phosphotransferase.
 
   0.803
AFO91271.1
Hypothetical protein.
 
  
 0.592
AFO91273.1
Transcriptional regulator, IclR family.
 
     0.550
dltA2
D-alanine--poly(phosphoribitol) ligase subunit.
 
  
 0.490
AFO91268.1
Putative transcriptional activator protein.
     
 0.461
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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