Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO90269.1 | AFO91268.1 | PGA1_c05370 | PGA1_c15590 | Polyketide synthase. | Putative transcriptional activator protein. | 0.628 |
AFO90269.1 | AFO91270.1 | PGA1_c05370 | PGA1_c15610 | Polyketide synthase. | Alcohol dehydrogenase, zinc binding protein. | 0.968 |
AFO90269.1 | AFO91271.1 | PGA1_c05370 | PGA1_c15620 | Polyketide synthase. | Hypothetical protein. | 0.866 |
AFO90269.1 | AFO91272.1 | PGA1_c05370 | PGA1_c15630 | Polyketide synthase. | Putative aminoglycoside phosphotransferase. | 0.554 |
AFO90269.1 | dltA2 | PGA1_c05370 | PGA1_c13780 | Polyketide synthase. | D-alanine--poly(phosphoribitol) ligase subunit. | 0.999 |
AFO90269.1 | fabB | PGA1_c05370 | PGA1_c04650 | Polyketide synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase FabB; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.974 |
AFO90269.1 | fabD | PGA1_c05370 | PGA1_c17940 | Polyketide synthase. | Malonyl CoA-acyl carrier protein transacylase FabD. | 0.999 |
AFO90269.1 | fabF1 | PGA1_c05370 | PGA1_c15980 | Polyketide synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase FabF; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.974 |
AFO90269.1 | fabF2 | PGA1_c05370 | PGA1_c17890 | Polyketide synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.974 |
AFO91268.1 | AFO90269.1 | PGA1_c15590 | PGA1_c05370 | Putative transcriptional activator protein. | Polyketide synthase. | 0.628 |
AFO91268.1 | AFO91270.1 | PGA1_c15590 | PGA1_c15610 | Putative transcriptional activator protein. | Alcohol dehydrogenase, zinc binding protein. | 0.461 |
AFO91268.1 | AFO91271.1 | PGA1_c15590 | PGA1_c15620 | Putative transcriptional activator protein. | Hypothetical protein. | 0.403 |
AFO91270.1 | AFO90269.1 | PGA1_c15610 | PGA1_c05370 | Alcohol dehydrogenase, zinc binding protein. | Polyketide synthase. | 0.968 |
AFO91270.1 | AFO91268.1 | PGA1_c15610 | PGA1_c15590 | Alcohol dehydrogenase, zinc binding protein. | Putative transcriptional activator protein. | 0.461 |
AFO91270.1 | AFO91271.1 | PGA1_c15610 | PGA1_c15620 | Alcohol dehydrogenase, zinc binding protein. | Hypothetical protein. | 0.592 |
AFO91270.1 | AFO91272.1 | PGA1_c15610 | PGA1_c15630 | Alcohol dehydrogenase, zinc binding protein. | Putative aminoglycoside phosphotransferase. | 0.803 |
AFO91270.1 | AFO91273.1 | PGA1_c15610 | PGA1_c15640 | Alcohol dehydrogenase, zinc binding protein. | Transcriptional regulator, IclR family. | 0.550 |
AFO91270.1 | dltA2 | PGA1_c15610 | PGA1_c13780 | Alcohol dehydrogenase, zinc binding protein. | D-alanine--poly(phosphoribitol) ligase subunit. | 0.490 |
AFO91270.1 | fabB | PGA1_c15610 | PGA1_c04650 | Alcohol dehydrogenase, zinc binding protein. | 3-oxoacyl-[acyl-carrier-protein] synthase FabB; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.887 |
AFO91270.1 | fabD | PGA1_c15610 | PGA1_c17940 | Alcohol dehydrogenase, zinc binding protein. | Malonyl CoA-acyl carrier protein transacylase FabD. | 0.837 |
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