STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91272.1Putative aminoglycoside phosphotransferase. (358 aa)    
Predicted Functional Partners:
AFO90289.1
acyl-CoA dehydrogenase-like protein.
 
 0.981
acdA3
acyl-CoA dehydrogenase AcdA.
 
 
 0.917
acdA2
acyl-CoA dehydrogenase AcdA.
 
 
 0.883
AFO91271.1
Hypothetical protein.
 
     0.876
acdA1
acyl-CoA dehydrogenase AcdA.
 
 
 0.872
AFO91270.1
Alcohol dehydrogenase, zinc binding protein.
 
   0.803
AFO90147.1
Putative acyl-CoA dehydrogenase.
 
 0.766
AFO90923.1
acyl-CoA dehydrogenase.
 
 0.719
AFO91273.1
Transcriptional regulator, IclR family.
  
    0.706
tesB
acyl-CoA thioesterase II.
 
  
 0.671
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.