Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO89999.1 | AFO91308.1 | PGA1_c02650 | PGA1_c16020 | Hypothetical protein. | Hypothetical protein. | 0.654 |
AFO91305.1 | AFO91307.1 | PGA1_c15990 | PGA1_c16010 | Putative acyl carrier protein. | Putative L,D-transpeptidase. | 0.754 |
AFO91305.1 | AFO91308.1 | PGA1_c15990 | PGA1_c16020 | Putative acyl carrier protein. | Hypothetical protein. | 0.471 |
AFO91305.1 | lpxD | PGA1_c15990 | PGA1_c16000 | Putative acyl carrier protein. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD. | 0.872 |
AFO91307.1 | AFO91305.1 | PGA1_c16010 | PGA1_c15990 | Putative L,D-transpeptidase. | Putative acyl carrier protein. | 0.754 |
AFO91307.1 | AFO91308.1 | PGA1_c16010 | PGA1_c16020 | Putative L,D-transpeptidase. | Hypothetical protein. | 0.884 |
AFO91307.1 | AFO93113.1 | PGA1_c16010 | PGA1_c34770 | Putative L,D-transpeptidase. | Hypothetical protein. | 0.475 |
AFO91307.1 | AFO93115.1 | PGA1_c16010 | PGA1_c34790 | Putative L,D-transpeptidase. | Hypothetical protein. | 0.434 |
AFO91307.1 | lpxD | PGA1_c16010 | PGA1_c16000 | Putative L,D-transpeptidase. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD. | 0.787 |
AFO91307.1 | mepA | PGA1_c16010 | PGA1_c31940 | Putative L,D-transpeptidase. | Penicillin-insensitive murein endopeptidase MepA. | 0.410 |
AFO91308.1 | AFO89999.1 | PGA1_c16020 | PGA1_c02650 | Hypothetical protein. | Hypothetical protein. | 0.654 |
AFO91308.1 | AFO91305.1 | PGA1_c16020 | PGA1_c15990 | Hypothetical protein. | Putative acyl carrier protein. | 0.471 |
AFO91308.1 | AFO91307.1 | PGA1_c16020 | PGA1_c16010 | Hypothetical protein. | Putative L,D-transpeptidase. | 0.884 |
AFO91308.1 | AFO91432.1 | PGA1_c16020 | PGA1_c17320 | Hypothetical protein. | Hypothetical protein. | 0.429 |
AFO91308.1 | AFO93113.1 | PGA1_c16020 | PGA1_c34770 | Hypothetical protein. | Hypothetical protein. | 0.570 |
AFO91308.1 | AFO93115.1 | PGA1_c16020 | PGA1_c34790 | Hypothetical protein. | Hypothetical protein. | 0.467 |
AFO91308.1 | lpxD | PGA1_c16020 | PGA1_c16000 | Hypothetical protein. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD. | 0.432 |
AFO91308.1 | mepA | PGA1_c16020 | PGA1_c31940 | Hypothetical protein. | Penicillin-insensitive murein endopeptidase MepA. | 0.714 |
AFO91432.1 | AFO91308.1 | PGA1_c17320 | PGA1_c16020 | Hypothetical protein. | Hypothetical protein. | 0.429 |
AFO91432.1 | AFO93115.1 | PGA1_c17320 | PGA1_c34790 | Hypothetical protein. | Hypothetical protein. | 0.767 |
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