STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91360.1Extracellular ligand binding domain-containing protein. (378 aa)    
Predicted Functional Partners:
AFO91358.1
Putative branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.958
AFO91359.1
Putative branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.940
AFO91357.1
Putative branched-chain amino acid transporter, ATP-binding protein.
 
  
 0.936
AFO91356.1
Putative branched-chain amino acid transporter, ATP-binding protein.
 
  
 0.914
AFO92788.1
Putative receptor family ligand-binding protein.
   
 
0.905
AFO89998.1
Putative amino acid binding protein.
     
 
0.900
AFO90984.1
Conserved hypothetical protein, associated with transport.
   
 
 
0.900
AFO91296.1
Extracellular ligand-binding receptor.
     
  0.900
AFO92895.1
Putative branched-chain amino acid transport system.
     
  0.900
AFO92791.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.619
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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