STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91371.1Binding protein-dependent transport system, inner membrane component. (283 aa)    
Predicted Functional Partners:
AFO91372.1
Binding protein-dependent transport system, inner membrane component.
 
 0.987
AFO91373.1
Extracellular solute-binding protein.
 
 
 0.967
AFO91370.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.965
AFO92732.1
Putative ABC transporter permease protein.
 
 0.901
AFO90469.1
Binding protein dependent transport system permease.
 
 0.881
AFO91640.1
ABC transporter, inner-membrane protein.
 
 0.870
AFO91638.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.853
ugpC1
Sn-glycerol-3-phosphate import ATP-binding protein UgbC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.845
AFO92731.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.839
aglK
Alpha-glucoside transport ATP-binding protein AglK; Belongs to the ABC transporter superfamily.
 
 0.833
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.