STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91483.1Putative gene transfer agent prohead protease. (205 aa)    
Predicted Functional Partners:
AFO91482.1
Gene transfer agent major capsid protein.
  
 0.994
AFO91485.1
Putative gene transfer agent portal protein.
 
   
 0.928
AFO91486.1
Putative gene transfer agent large terminase.
 
     0.880
AFO91479.1
Putative gene transfer agent protein.
 
    0.878
AFO91481.1
Putative gene transfer agent protein.
 
     0.878
AFO91480.1
Putative gene transfer agent head-tail adaptor.
 
   
 0.870
AFO91478.1
Putative gene transfer agent major tail protein.
 
    0.867
AFO91475.1
Putative gene transfer agent tail tape measure protein.
 
    0.862
AFO91477.1
Hypothetical protein.
 
    0.862
AFO91474.1
Putative gene transfer agent protein.
 
   
 0.860
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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