STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91637.1Transcription regulator, GntR family. (242 aa)    
Predicted Functional Partners:
AFO90395.1
Transcriptional regulator, GntR family.
  
  
 0.744
AFO91797.1
Transcriptional regulator, GntR fmaily.
  
  
 0.689
AFO91100.1
Transcriptional regulator, GntR family.
 
     0.661
AFO91639.1
ABC transporter, inner-membrane protein.
  
    0.659
AFO91638.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.648
AFO91640.1
ABC transporter, inner-membrane protein.
       0.648
AFO89984.1
Transcriptional regulator, GntR family.
  
  
 0.644
AFO91373.1
Extracellular solute-binding protein.
  
    0.637
AFO93077.1
HTH-type transcriptional regulator, GntR family.
  
  
 0.628
AFO90242.1
Transcriptional regulator, GntR type.
  
  
 0.613
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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