STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91638.1ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (363 aa)    
Predicted Functional Partners:
AFO91640.1
ABC transporter, inner-membrane protein.
 
 0.989
AFO91639.1
ABC transporter, inner-membrane protein.
 
 0.986
AFO91641.1
Putative sugar-binding periplasmic protein.
  
  0.945
AFO92461.1
ABC transporter permease protein.
 0.934
aglF
Alpha-glucoside transport system permease protein AglF.
 
 0.917
AFO91036.1
ABC transporter permease protein.
 
 0.914
AFO92460.1
ABC transporter permease protein.
 
 0.913
aglG
Alpha-glucoside transport system permease protein AglG.
 
 0.912
AFO92731.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.910
AFO92399.1
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.908
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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