STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91714.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
AFO91715.1
Amidase-like protein.
       0.712
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.534
cccQ
Cytochrome c oxidase subunit 4.
 
     0.531
AFO92909.1
Hypothetical protein.
  
    0.498
AFO91851.1
Hypothetical protein.
  
     0.488
AFO90720.1
Hypothetical protein.
  
     0.483
AFO90621.1
Hypothetical protein.
  
     0.481
ccoP
Cytochrome c oxidase subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
     0.443
AFO90641.1
Hypothetical protein.
  
     0.439
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.