Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO91484.1 | AFO91720.1 | PGA1_c17840 | PGA1_c20310 | Hypothetical protein. | Putative metalloprotease. | 0.441 |
AFO91719.1 | AFO91720.1 | PGA1_c20300 | PGA1_c20310 | Aminotransferase. | Putative metalloprotease. | 0.742 |
AFO91719.1 | AFO91721.1 | PGA1_c20300 | PGA1_c20320 | Aminotransferase. | Hypothetical protein. | 0.729 |
AFO91719.1 | amiC | PGA1_c20300 | PGA1_c20290 | Aminotransferase. | Putative N-acetylmuramoyl-L-alanine amidase AmiC. | 0.690 |
AFO91720.1 | AFO91484.1 | PGA1_c20310 | PGA1_c17840 | Putative metalloprotease. | Hypothetical protein. | 0.441 |
AFO91720.1 | AFO91719.1 | PGA1_c20310 | PGA1_c20300 | Putative metalloprotease. | Aminotransferase. | 0.742 |
AFO91720.1 | AFO91721.1 | PGA1_c20310 | PGA1_c20320 | Putative metalloprotease. | Hypothetical protein. | 0.860 |
AFO91720.1 | amiC | PGA1_c20310 | PGA1_c20290 | Putative metalloprotease. | Putative N-acetylmuramoyl-L-alanine amidase AmiC. | 0.477 |
AFO91721.1 | AFO91719.1 | PGA1_c20320 | PGA1_c20300 | Hypothetical protein. | Aminotransferase. | 0.729 |
AFO91721.1 | AFO91720.1 | PGA1_c20320 | PGA1_c20310 | Hypothetical protein. | Putative metalloprotease. | 0.860 |
AFO91721.1 | amiC | PGA1_c20320 | PGA1_c20290 | Hypothetical protein. | Putative N-acetylmuramoyl-L-alanine amidase AmiC. | 0.537 |
amiC | AFO91719.1 | PGA1_c20290 | PGA1_c20300 | Putative N-acetylmuramoyl-L-alanine amidase AmiC. | Aminotransferase. | 0.690 |
amiC | AFO91720.1 | PGA1_c20290 | PGA1_c20310 | Putative N-acetylmuramoyl-L-alanine amidase AmiC. | Putative metalloprotease. | 0.477 |
amiC | AFO91721.1 | PGA1_c20290 | PGA1_c20320 | Putative N-acetylmuramoyl-L-alanine amidase AmiC. | Hypothetical protein. | 0.537 |