STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctM5TRAP transporter, subunit DctM. (467 aa)    
Predicted Functional Partners:
dctQ4
TRAP transporter, subunit DctQ.
 
 
 0.969
dctM7
TRAP transporter, subunit DctM.
  
  
 
0.926
dctM1
TRAP transporter, subunit DctM.
  
  
 
0.922
dctP3
C4-dicarboxylate-binding periplasmic protein DctP.
  
 0.913
AFO91030.1
Putative TRAP transporter extracellular solute binding protein, family 7.
 
  
 0.725
dctP5
TRAP transporter, subunit DctP.
 
  
 0.651
dctQ1
TRAP transporter, subunit DctQ.
 
 
 0.534
dctP1
TRAP transporter, subunit DctP.
 
  
 0.442
dctP2
TRAP transporter, subunit DctP; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.424
dctQ3
TRAP transporter, subunit DctQ.
  
 
 0.409
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.