STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91847.1Putative serralysin. (482 aa)    
Predicted Functional Partners:
AFO91399.1
Hypothetical protein.
  
     0.773
AFO90002.1
Hypothetical protein.
  
     0.770
aprD
Alkaline protease secretion ATP-binding protein AprD.
 
 
 0.648
AFO92590.1
Putative HlyD family secretion protein.
 
  
 0.632
AFO91848.1
Putative bicyclomycin resistance protein.
       0.620
pccB
propionyl-CoA carboxylase beta chain.
       0.572
AFO90269.1
Polyketide synthase.
 
   
 0.541
AFO92727.1
Putative phage integrase; Belongs to the 'phage' integrase family.
  
     0.526
AFO89978.1
Putative ATP-binding/permease fusion ABC transporter.
 
  
 0.511
AFO91844.1
Hypothetical protein.
 
     0.478
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.