STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO91950.1Putative phage integrase protein; Belongs to the 'phage' integrase family. (343 aa)    
Predicted Functional Partners:
AFO91951.1
Hypothetical protein.
       0.773
AFO91952.1
Hypothetical protein.
       0.701
AFO91983.1
Hypothetical protein.
  
     0.696
virD2
Putative protein VirD2.
  
     0.693
AFO91965.1
Hypothetical protein.
  
     0.675
AFO91954.1
Hypothetical protein.
  
     0.640
AFO91972.1
Hypothetical protein.
  
     0.539
AFO91953.1
Helix-turn-helix domain-containing protein.
     
 0.504
virB10
Putative type IV secretion system protein VirB10.
  
     0.488
virB6
Putative type IV secretion system protein VirB6.
  
     0.486
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.