STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acdA2acyl-CoA dehydrogenase AcdA. (386 aa)    
Predicted Functional Partners:
fadJ
Fatty acid oxidation complex FadJ subunit alpha; Includes enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase.
 
 0.978
AFO92028.1
Putative benzoate-CoA ligase.
  
 0.952
AFO91274.1
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.951
AFO92030.1
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.945
AFO91435.1
Putative 3-hydroxyisobutyryl-CoA hydrolase.
  
 0.941
paaJ
beta-ketoadipyl-CoA thiolase PaaJ; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.934
etfA
Electron transfer flavoprotein subunit alpha.
 
 0.925
AFO90750.1
methylcrotonoyl-CoA carboxylase beta chain.
 
 
 0.922
AFO91279.1
acyl-CoA dehydrogenase.
  
  
 
0.919
AFO90751.1
methylcrotonoyl-CoA carboxylase subunit alpha.
  
 0.918
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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