Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO92013.1 | AFO92047.1 | PGA1_c23290 | PGA1_c23620 | Putative choline/ethanolamine kinase. | Hypothetical protein. | 0.422 |
AFO92047.1 | AFO92013.1 | PGA1_c23620 | PGA1_c23290 | Hypothetical protein. | Putative choline/ethanolamine kinase. | 0.422 |
AFO92047.1 | AFO92048.1 | PGA1_c23620 | PGA1_c23630 | Hypothetical protein. | Putative transcriptional regulator. | 0.480 |
AFO92047.1 | purD | PGA1_c23620 | PGA1_c23610 | Hypothetical protein. | Phosphoribosylamine--glycine ligase PurD; Belongs to the GARS family. | 0.425 |
AFO92048.1 | AFO92047.1 | PGA1_c23630 | PGA1_c23620 | Putative transcriptional regulator. | Hypothetical protein. | 0.480 |
purD | AFO92047.1 | PGA1_c23610 | PGA1_c23620 | Phosphoribosylamine--glycine ligase PurD; Belongs to the GARS family. | Hypothetical protein. | 0.425 |