Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO92069.1 | AFO92070.1 | PGA1_c23840 | PGA1_c23850 | Transposase. | Transposase. | 0.854 |
AFO92069.1 | AFO92071.1 | PGA1_c23840 | PGA1_c23860 | Transposase. | Hypothetical protein. | 0.419 |
AFO92069.1 | dnaB | PGA1_c23840 | PGA1_c10890 | Transposase. | Replicative DNA helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.450 |
AFO92069.1 | nthA | PGA1_c23840 | PGA1_c23880 | Transposase. | Nitrile hydratase subunit alpha. | 0.419 |
AFO92069.1 | nthB | PGA1_c23840 | PGA1_c23870 | Transposase. | Nitrile hydratase subunit beta. | 0.419 |
AFO92070.1 | AFO92069.1 | PGA1_c23850 | PGA1_c23840 | Transposase. | Transposase. | 0.854 |
AFO92070.1 | AFO92071.1 | PGA1_c23850 | PGA1_c23860 | Transposase. | Hypothetical protein. | 0.419 |
AFO92070.1 | nthA | PGA1_c23850 | PGA1_c23880 | Transposase. | Nitrile hydratase subunit alpha. | 0.419 |
AFO92070.1 | nthB | PGA1_c23850 | PGA1_c23870 | Transposase. | Nitrile hydratase subunit beta. | 0.419 |
AFO92071.1 | AFO92069.1 | PGA1_c23860 | PGA1_c23840 | Hypothetical protein. | Transposase. | 0.419 |
AFO92071.1 | AFO92070.1 | PGA1_c23860 | PGA1_c23850 | Hypothetical protein. | Transposase. | 0.419 |
AFO92071.1 | nthA | PGA1_c23860 | PGA1_c23880 | Hypothetical protein. | Nitrile hydratase subunit alpha. | 0.968 |
AFO92071.1 | nthB | PGA1_c23860 | PGA1_c23870 | Hypothetical protein. | Nitrile hydratase subunit beta. | 0.968 |
dnaB | AFO92069.1 | PGA1_c10890 | PGA1_c23840 | Replicative DNA helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Transposase. | 0.450 |
nthA | AFO92069.1 | PGA1_c23880 | PGA1_c23840 | Nitrile hydratase subunit alpha. | Transposase. | 0.419 |
nthA | AFO92070.1 | PGA1_c23880 | PGA1_c23850 | Nitrile hydratase subunit alpha. | Transposase. | 0.419 |
nthA | AFO92071.1 | PGA1_c23880 | PGA1_c23860 | Nitrile hydratase subunit alpha. | Hypothetical protein. | 0.968 |
nthA | nthB | PGA1_c23880 | PGA1_c23870 | Nitrile hydratase subunit alpha. | Nitrile hydratase subunit beta. | 0.999 |
nthB | AFO92069.1 | PGA1_c23870 | PGA1_c23840 | Nitrile hydratase subunit beta. | Transposase. | 0.419 |
nthB | AFO92070.1 | PGA1_c23870 | PGA1_c23850 | Nitrile hydratase subunit beta. | Transposase. | 0.419 |
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