STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO92293.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
AFO92294.1
Putative N-acetyltransferase.
  
    0.660
lysS
Putative lysyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.649
AFO93254.1
Hypothetical protein.
  
     0.609
AFO93188.1
HemY-like protein.
  
     0.591
AFO91833.1
dnaJ domain-containing protein.
  
     0.575
AFO90307.1
Hypothetical protein.
  
     0.558
AFO91807.1
Transcriptional regulator, MarR family.
  
     0.512
AFO92291.1
Hypothetical protein.
 
     0.502
AFO89848.1
Hypothetical protein.
  
     0.474
AFO93187.1
Hypothetical protein.
  
     0.469
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.