STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO92323.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (285 aa)    
Predicted Functional Partners:
AFO91813.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.706
AFO90559.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.702
AFO92222.1
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.702
AFO92390.1
Transcriptional regulator, lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.684
AFO91039.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.677
AFO92246.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.660
AFO90202.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.647
AFO92233.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.625
AFO93017.1
Putative HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.607
AFO90890.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.604
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.