STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO92398.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
AFO92400.1
Putative extracellular solute-binding protein.
 
     0.854
AFO92401.1
ABC transporter, permease protein.
 
     0.834
AFO92402.1
ABC transporter, permease protein.
 
     0.833
AFO92408.1
Hypothetical protein.
 
     0.815
AFO92399.1
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.804
AFO92409.1
Hypothetical protein.
 
     0.803
AFO92410.1
2-hydroxypropyl-CoM lyase-like protein.
 
     0.789
AFO92412.1
Hypothetical protein.
 
     0.789
AFO92397.1
Amidohydrolase.
       0.773
AFO92407.1
Transcriptional regulator, lacI family.
 
     0.723
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.