Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFO92430.1 | AFO92432.1 | PGA1_c27630 | PGA1_c27650 | Putative formate dehydrogenase gamma subunit. | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.997 |
AFO92430.1 | AFO92433.1 | PGA1_c27630 | PGA1_c27660 | Putative formate dehydrogenase gamma subunit. | Hypothetical protein. | 0.882 |
AFO92430.1 | AFO92434.1 | PGA1_c27630 | PGA1_c27670 | Putative formate dehydrogenase gamma subunit. | Cytoplasmic chaperon TorD-like protein. | 0.898 |
AFO92430.1 | AFO92435.1 | PGA1_c27630 | PGA1_c27680 | Putative formate dehydrogenase gamma subunit. | Hypothetical protein. | 0.846 |
AFO92430.1 | AFO92436.1 | PGA1_c27630 | PGA1_c27690 | Putative formate dehydrogenase gamma subunit. | Hypothetical protein. | 0.846 |
AFO92430.1 | AFO92437.1 | PGA1_c27630 | PGA1_c27700 | Putative formate dehydrogenase gamma subunit. | Hypothetical protein. | 0.866 |
AFO92430.1 | AFO92440.1 | PGA1_c27630 | PGA1_c27730 | Putative formate dehydrogenase gamma subunit. | Hypothetical protein. | 0.810 |
AFO92430.1 | AFO92441.1 | PGA1_c27630 | PGA1_c27740 | Putative formate dehydrogenase gamma subunit. | Hypothetical protein. | 0.790 |
AFO92430.1 | fdhB | PGA1_c27630 | PGA1_c27640 | Putative formate dehydrogenase gamma subunit. | Formate dehydrogenase iron-sulfur subunit. | 0.998 |
AFO92432.1 | AFO92430.1 | PGA1_c27650 | PGA1_c27630 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative formate dehydrogenase gamma subunit. | 0.997 |
AFO92432.1 | AFO92433.1 | PGA1_c27650 | PGA1_c27660 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.818 |
AFO92432.1 | AFO92434.1 | PGA1_c27650 | PGA1_c27670 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytoplasmic chaperon TorD-like protein. | 0.911 |
AFO92432.1 | AFO92435.1 | PGA1_c27650 | PGA1_c27680 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.849 |
AFO92432.1 | AFO92436.1 | PGA1_c27650 | PGA1_c27690 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.862 |
AFO92432.1 | AFO92437.1 | PGA1_c27650 | PGA1_c27700 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.920 |
AFO92432.1 | AFO92440.1 | PGA1_c27650 | PGA1_c27730 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.750 |
AFO92432.1 | AFO92441.1 | PGA1_c27650 | PGA1_c27740 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.774 |
AFO92432.1 | fdhB | PGA1_c27650 | PGA1_c27640 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase iron-sulfur subunit. | 0.999 |
AFO92432.1 | mobA | PGA1_c27650 | PGA1_c03240 | Putative formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | 0.415 |
AFO92433.1 | AFO92430.1 | PGA1_c27660 | PGA1_c27630 | Hypothetical protein. | Putative formate dehydrogenase gamma subunit. | 0.882 |
page 1 of 5