STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
edaKHG/KDPG aldolase. (215 aa)    
Predicted Functional Partners:
edd
Phosphogluconate dehydratase Edd; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 0.999
pgi
Glucose-6-phosphate isomerase Pgi; Belongs to the GPI family.
  
 
 0.939
glk
Glucokinase Glk; Belongs to the bacterial glucokinase family.
 
 
 0.935
glcD
Glycolate oxidase subunit GlcD.
   
 
 0.910
glcE
Glycolate oxidase subunit GlcE.
   
 
 0.908
glcB
Malate synthase GlcB; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
 0.906
gyaR1
Glyoxylate reductase GyaR; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.904
AFO92325.1
Putative glyoxylate/hydroxypyruvate reductase A.
    
 0.904
gyaR2
Glyoxylate reductase GyaR; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.904
glcF
Glycolate oxidase iron-sulfur subunit.
     
 0.904
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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