STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO92499.1ABC transporter permease protein. (283 aa)    
Predicted Functional Partners:
AFO92498.1
ABC transporter, ATP-binding protein.
  
 0.987
AFO92497.1
Hypothetical protein.
 
  
 0.963
ssuD
Alkanesulfonate monooxygenase SsuD.
 
  
 0.898
AFO91003.1
Putative taurine import ATP-binding protein.
  
 0.848
AFO91006.1
Putative thiamine biosynthesis protein.
  
  
 0.799
tauD
Alpha-ketoglutarate-dependent taurine dioxygenase TauD.
 
  
 0.503
icd
Isocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family.
       0.476
AFO92496.1
Transcriptional regulator, GntR family.
  
    0.449
AFO91004.1
Putative ABC transporter permease protein.
 
   
0.432
cysC
Putative bifunctional SAT/APS kinase; Catalyzes the synthesis of activated sulfate.
  
    0.409
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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