STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO92711.1Hypothetical protein. (959 aa)    
Predicted Functional Partners:
AFO89978.1
Putative ATP-binding/permease fusion ABC transporter.
 
  
 0.551
AFO89977.1
Type I secretion membrane fusion protein, HlyD family.
 
  
 0.521
AFO89979.1
Putative outer membrane efflux protein.
 
  
 0.479
ftsK
Putative DNA translocase FtsK.
   
 
 0.473
AFO91847.1
Putative serralysin.
 
0.451
aprD
Alkaline protease secretion ATP-binding protein AprD.
 
   
 0.450
AFO93257.1
Putative metallopeptidase.
 
 
0.447
AFO91399.1
Hypothetical protein.
 
 
0.441
AFO91512.1
Hypothetical protein.
 
 
  
0.441
AFO91448.1
Hemolysin-type calcium-binding repeat-containing protein.
 
 
0.439
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.