STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO92778.1Hypothetical protein. (374 aa)    
Predicted Functional Partners:
AFO92775.1
ABC transporter permease protein.
 
 0.988
AFO92776.1
ABC transporter ATP-binding protein.
 
 
 0.987
AFO92777.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.986
potI
Putrescine transport system permease protein PotI.
  
 0.880
potH
Putrescine transport system permease protein PotH.
 
  
 0.826
potB
Spermidine/putrescine transport system permease protein PotB.
 
  
 0.740
potC
Spermidine/putrescine transport system permease protein PotC.
  
 0.691
potG
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.684
AFO90786.1
Putative putrescine transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.549
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.546
Your Current Organism:
Phaeobacter inhibens
NCBI taxonomy Id: 391619
Other names: P. inhibens DSM 17395, Phaeobacter gallaeciensis DSM 17395, Phaeobacter inhibens DSM 17395
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.